Spatial Omics Methods Literature

Histology

• 39934114 (Wang, Yang, 2025 Nat Comm) - Benchmark spatial gene expression prediction from H&E images using 150 to 200 μm spot

Domain

• 39849132 (Chitra, Raphael, 2025 Nat Methods) - GASTON: Use isodepth from topographic map to define spatial domains and learn piecewise linear functions to model continuouse gradients and discontinuity in gene expression